Description
Azimuth is a web application that uses an annotated reference dataset to automate the processing, analysis, and interpretation of a new single-cell RNA-seq experiment. Azimuth leverages a ‘reference-based mapping’ pipeline that inputs a counts matrix of gene expression in single cells, and performs normalization, visualization, cell annotation, and differential expression (biomarker……
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Azimuth FAQ
What is Azimuth?
Azimuth is a web application that uses an annotated reference dataset to automate the processing, analysis, and interpretation of a new single-cell RNA-seq experiment. Azimuth leverages a ‘reference-based mapping’ pipeline that inputs a counts matrix of gene expression in single cells, and performs normalization, visualization, cell annotation, and differential expression (biomarker…
Is Azimuth free?
Yes. Azimuth is free to use.
Do I need to download Azimuth?
No. Azimuth runs in your browser at satijalab.org, so there's nothing to install.
Who makes Azimuth?
Azimuth is made by satijalab.
What are the best Azimuth alternatives?
Popular alternatives to Azimuth include Squidpy, Builder.io and Elasticsearch. See all Azimuth alternatives