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nextflow

Self-hosted alternatives to nextflow

5 self-hosted AI Skills apps to use instead, best rated first.

Top picks

  1. C

    claude-to-deerflow

    Launch

    claude-to-deerflow is an agent skill that lets an assistant send messages and questions to a running DeerFlow instance through its HTTP API. DeerFlow is an AI agent platform built on LangGraph that orchestrates sub-agents for research, code

    Self-hosted

  2. O

    open-notebook

    Launch

    open-notebook is an agent skill for organising research with Open Notebook, a self-hosted alternative to NotebookLM. It arranges sources, notes and AI conversations into research notebooks. Sources can be PDFs, web pages, audio, video and O

    Self-hosted

  3. R

    Reactive Resume

    Launch

    Reactive Resume is a free and open-source resume builder for writing resumes and cover letters, checking the work, and tracking job applications. You create a free account, import an existing resume or start from scratch, and see the finish

    Open sourceSelf-hosted

  4. S

    self-hosted-funnel-launch

    Launch

    Self-hosted funnel launch is an agent skill that takes a funnel from an empty install to published on infrastructure you control, using the Autonnel funnel builder, which is licensed Apache-2.0. The result covers a landing page, checkout, a

    Self-hosted

  5. G

    get-convex/convex-backend

    Launch

    Convex is an open-source reactive database for web app developers. It combines a database, a place to write server functions in pure TypeScript, and client libraries that keep the app's data live, so screens update as the data changes. Beca

    Self-hosted

About nextflow

N

nextflow

Builds, runs, and debugs Nextflow DSL2 pipelines and nf-core workflows

nextflow is an agent skill for building, running and debugging Nextflow DSL2 pipelines and nf-core workflows. Nextflow is a workflow language and runtime for reproducible, portable and scalable data pipelines, and it is widely used in bioinformatics, though it works for any data-heavy computation. nf-core is a community that curates production-grade Nextflow pipelines, reusable modules and tooling. The skill explains the key ideas. Pipelines are made of processes connected by channels, and Nextflow works out the execution order and parallelism from the data dependencies. The same pipeline can run on a laptop, on HPC schedulers such as SLURM, SGE, LSF and PBS, or on cloud batch services and Kubernetes, by changing configuration profiles rather than code. Reproducibility comes from pinned software environments, pinned pipeline revisions, and recorded parameters. The skill is clear that resuming a run is a computational cache rather than scientific validation, and that Conda is an environment manager while Wave builds images. DSL2 is the required syntax.

View nextflowAll AI Skills apps
Price
Free
Made by
k-dense-ai
Category
AI Skills
Website
github.com/k-dense-ai/scientific-agent-skills/nextflow