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pubmed-database

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About pubmed-database

P

pubmed-database

Direct PubMed and NCBI E-utilities search workflows for biomedical literature

pubmed-database is an agent skill from the ECC collection by affaan-m, listed on skills.sh. It runs direct searches of PubMed and NCBI E-utilities for biomedical literature, for cases where a general web search is not enough. It covers building queries with MeSH terms, field tags, dates and article types, looking up PMIDs, abstracts and publication metadata, retrieving related citations, and running repeatable search strings for systematic-review passes. It also covers calling the NCBI E-utilities from Python, shell or another HTTP client. The query method is to start from the research question, split it into concepts, and combine those concepts with Boolean operators. The skill applies when someone is searching MEDLINE or life-science literature, preparing a systematic review search, or needs a precise record for a paper. A skill is a SKILL.md file of instructions that an AI agent loads when a task calls for it. It is free and open source, and the skills.sh listing shows a Snyk warning, with Gen Agent Trust Hub and Socket passing.

Price
Free
Made by
affaan-m
Category
AI Skills
Website
github.com/affaan-m/ecc/pubmed-database