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scvi-tools

Self-hosted alternatives to scvi-tools

5 self-hosted AI Skills apps to use instead, best rated first.

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About scvi-tools

S

scvi-tools

Deep learning for single-cell analysis using scvi-tools

Scvi-tools is an agent skill that guides deep-learning analysis of single-cell genomics data using the scvi-tools framework. It is aimed at researchers and bioinformaticians who work with single-cell data and want help choosing the right probabilistic model. Its main use cases are data integration and batch correction, which it handles with the scVI and scANVI models. The skill works in three steps: first identify the right workflow from the model and workflow tables it contains, then read the matching reference file for detailed steps and code, and finally use the helper scripts it ships so common code does not have to be rewritten each time. Separate reference files cover environment and GPU setup and debugging. The skill is part of Anthropic's knowledge-work plugins and is listed as free on skills.sh.

View scvi-toolsAll AI Skills apps
Price
Free
Made by
anthropics
Category
AI Skills
Website
github.com/anthropics/knowledge-work-plugins/scvi-tools