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scvelo

Self-hosted alternatives to scvelo

5 self-hosted AI Skills apps to use instead, best rated first.

Top picks

  1. C

    claude-to-deerflow

    Launch

    claude-to-deerflow is an agent skill that lets an assistant send messages and questions to a running DeerFlow instance through its HTTP API. DeerFlow is an AI agent platform built on LangGraph that orchestrates sub-agents for research, code

    Self-hosted

  2. O

    open-notebook

    Launch

    open-notebook is an agent skill for organising research with Open Notebook, a self-hosted alternative to NotebookLM. It arranges sources, notes and AI conversations into research notebooks. Sources can be PDFs, web pages, audio, video and O

    Self-hosted

  3. R

    Reactive Resume

    Launch

    Reactive Resume is a free and open-source resume builder for writing resumes and cover letters, checking the work, and tracking job applications. You create a free account, import an existing resume or start from scratch, and see the finish

    Open sourceSelf-hosted

  4. S

    self-hosted-funnel-launch

    Launch

    Self-hosted funnel launch is an agent skill that takes a funnel from an empty install to published on infrastructure you control, using the Autonnel funnel builder, which is licensed Apache-2.0. The result covers a landing page, checkout, a

    Self-hosted

  5. G

    get-convex/convex-backend

    Launch

    Convex is an open-source reactive database for web app developers. It combines a database, a place to write server functions in pure TypeScript, and client libraries that keep the app's data live, so screens update as the data changes. Beca

    Self-hosted

About scvelo

S

scvelo

Performs RNA velocity analysis

scvelo is an agent skill for RNA velocity analysis with scVelo, which works from spliced and unspliced single-cell RNA counts. It fits deterministic or dynamical models, examines gene phase portraits and estimates dynamical latent time. Use it for kinetic analysis of aligned counts, for directional trajectory hypotheses, and for gene-level phase portraits. For model assumptions, transition probabilities and an optional handoff to CellRank, the skill points to a model reference. The skill is careful about what RNA velocity means. It estimates an expression derivative under a model. Smooth arrows are not observed cell movement, lineage tracing, causal drivers or proof of a cell's future fate. The dynamical estimator is not automatically more accurate than the steady-state estimator on every dataset. The maintained workflow targets scVelo 0.3.4, with Scanpy 1.12.4, AnnData 0.13.4, NumPy 2.5.3, pandas 2.3.3, SciPy 1.18.1, Matplotlib 3.11.2 and loompy 3.0.8 on Python 3.13, and the skill advises an isolated environment. It is part of the k-dense-ai scientific agent skills repository on GitHub, which has about 49,600 stars. The listing shows it as free, and it has about 1,800 installs.

View scveloAll AI Skills apps
Price
Free
Made by
k-dense-ai
Category
AI Skills
Website
github.com/k-dense-ai/scientific-agent-skills/scvelo