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dnanexus-integration

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About dnanexus-integration

D

dnanexus-integration

Builds and operates reproducible genomics workloads on DNAnexus

dnanexus-integration is an agent skill for building, running and operating genomics workloads on the DNAnexus platform. It covers the dx command-line tool and the dxpy Python library for automation, files, records, folders, projects and metadata. It also covers apps and applets defined by dxapp.json, jobs, workflow analyses, retries, monitoring and cost controls, native workflows, and WDL and CWL workflows through dxCompiler, plus Nextflow imports. The skill's aim is to let you operate the platform correctly rather than guess at its semantics. Use it when you need to run a reproducible sequencing or genomics pipeline on DNAnexus, to package an analysis as an app, or to manage data and cost on the platform. It is part of the k-dense-ai scientific agent skills repository on GitHub, which has about 49,600 stars. The listing shows it as free, and it has about 1,800 installs. Its security audits show passes from Gen Agent Trust Hub, Socket and Snyk. Install it with npx skills add https://github.com/k-dense-ai/scientific-agent-skills --skill dnanexus-integration.

View dnanexus-integrationAll AI Skills apps
Price
Free
Made by
k-dense-ai
Category
AI Skills
Website
github.com/k-dense-ai/scientific-agent-skills/dnanexus-integration